Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: vps53 ENSSTUG00000047643

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Description

VPS53 subunit of GARP complex [Source:ZFIN;Acc:ZDB-GENE-041114-199]

Location

Primary_assembly 13: 63,435,215-63,469,538 reverse strand.

fSalTru1.1:LR584428.1

About this gene

This gene has 8 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSTUT00000114970.1	vps53-201	4411	833aa	ENSSTUP00000107307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674EI32	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSTUT00000114980.1	vps53-202	4324	801aa	ENSSTUP00000107318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674EFZ2	-
ENSSTUT00000114984.1	vps53-203	4294	791aa	ENSSTUP00000107322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674EI42	-
ENSSTUT00000114997.1	vps53-204	3713	708aa	ENSSTUP00000107335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674EH52	-
ENSSTUT00000115013.1	vps53-205	2054	155aa	ENSSTUP00000107351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674EH43	-
ENSSTUT00000115025.1	vps53-207	1940	535aa	ENSSTUP00000107363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674EG31	-
ENSSTUT00000115021.1	vps53-206	1610	425aa	ENSSTUP00000107359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674EHI2	-
ENSSTUT00000115031.1	vps53-208	1409	358aa	ENSSTUP00000107369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674EHJ2	-

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Summary

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