Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: sox6 ENSSTUG00000019720

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Description

SRY-box transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]

Location

Primary_assembly 12: 24,755,847-24,939,345 forward strand.

fSalTru1.1:LR584441.1

About this gene

This gene has 10 transcripts (splice variants), 208 orthologues and 50 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSTUT00000052570.1	sox6-201	2718	822aa	ENSSTUP00000050270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZU43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSTUT00000052935.1	sox6-202	2700	816aa	ENSSTUP00000050617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZV89	-
ENSSTUT00000052945.1	sox6-203	2577	775aa	ENSSTUP00000050627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZV99	-
ENSSTUT00000052978.1	sox6-204	2466	661aa	ENSSTUP00000050659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZTJ6	-
ENSSTUT00000053052.1	sox6-206	2400	799aa	ENSSTUP00000050733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZV33	-
ENSSTUT00000053024.1	sox6-205	2391	796aa	ENSSTUP00000050707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZVI2	-
ENSSTUT00000053117.1	sox6-207	2196	731aa	ENSSTUP00000050798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZVA0	-
ENSSTUT00000053145.1	sox6-208	2187	728aa	ENSSTUP00000050823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZVC7	-
ENSSTUT00000053276.1	sox6-209	2016	671aa	ENSSTUP00000050952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZW81	-
ENSSTUT00000053294.1	sox6-210	2013	670aa	ENSSTUP00000050970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673ZW49	-

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Summary

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