Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COL12A1 ENSSTUG00000006486

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Description

collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]

Location

Primary_assembly 25: 34,788,381-34,848,579 reverse strand.

fSalTru1.1:LR584436.1

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSTUT00000016579.1	COL12A1-201	8940	2979aa	ENSSTUP00000015714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673WUK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSTUT00000017546.1	COL12A1-203	8673	2890aa	ENSSTUP00000016643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673X5E6	-
ENSSTUT00000018027.1	COL12A1-204	8484	2827aa	ENSSTUP00000017116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673X9N8	-
ENSSTUT00000017607.1	COL12A1-202	5187	1728aa	ENSSTUP00000016703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A673X5J4	-

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Summary

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