Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: col11a2 ENSSSAG00000077772

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Description

collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]

Location

Primary_assembly 27: 10,645,732-10,694,689 reverse strand.

Ssal_v3.1:HG993286.1

About this gene

This gene has 10 transcripts (splice variants), 198 orthologues and 139 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSSSAT00000250663.1	col11a2-206	8885	2158aa	ENSSSAP00000139301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSAT00000233578.1	col11a2-207	8765	2118aa	ENSSSAP00000170154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000161362.1	col11a2-205	8588	2090aa	ENSSSAP00000122814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000178283.1	col11a2-208	8561	2050aa	ENSSSAP00000159458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000249332.1	col11a2-209	7718	1769aa	ENSSSAP00000148765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000215783.1	col11a2-210	7394	1661aa	ENSSSAP00000146565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000233430.1	col11a2-204	7210	1729aa	ENSSSAP00000173686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000144879.2	col11a2-202	5632	1406aa	ENSSSAP00000109978.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000144868.2	col11a2-201	5623	1403aa	ENSSSAP00000109967.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSSSAT00000144885.2	col11a2-203	5218	1268aa	ENSSSAP00000109984.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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