Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: col1a1b ENSSSAG00000069947

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Description

collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]

Location

Primary_assembly 28: 18,990,507-19,075,351 reverse strand.

Ssal_v3.1:HG993287.1

About this gene

This gene has 8 transcripts (splice variants), 183 orthologues and 139 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSAT00000220692.1	col1a1b-207	6941	1455aa	ENSSSAP00000127030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1S3Q7E3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSAT00000243701.1	col1a1b-205	7270	1453aa	ENSSSAP00000181410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000231497.1	col1a1b-208	5892	1401aa	ENSSSAP00000174361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000244856.1	col1a1b-206	5803	1206aa	ENSSSAP00000162263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000240873.1	col1a1b-203	5641	1444aa	ENSSSAP00000138776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000121891.2	col1a1b-202	5617	1442aa	ENSSSAP00000087906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000193204.1	col1a1b-201	5364	1383aa	ENSSSAP00000181873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000121883.2	col1a1b-204	5350	1347aa	ENSSSAP00000087900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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