Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: rhobtb2b ENSDARG00000089340

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Description

Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]

Location

Chromosome 10: 42,678,520-42,716,739 forward strand.

GRCz11:CM002894.2

About this gene

This gene has 3 transcripts (splice variants), 135 orthologues and 42 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000182496.1	rhobtb2b-202	4693	764aa	ENSDARP00000147533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000123496.3	rhobtb2b-201	3916	714aa	ENSDARP00000108618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6W1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000193813.1	rhobtb2b-203	306	101aa	ENSDARP00000148948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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