Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: stx3a ENSDARG00000051981

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Description

syntaxin 3a [Source:ZFIN;Acc:ZDB-GENE-070620-13]

Gene Synonyms

zgc:165520

Location

Chromosome 1: 44,826,316-44,835,738 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146962.2	stx3a-202	1697	285aa	ENSDARP00000118118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A651	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162200.2	stx3a-203	978	325aa	ENSDARP00000132795.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142091.3	stx3a-201	1443	325aa	ENSDARP00000113682.1	Nonsense mediated decay	-	-

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Summary

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