Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Nlgn1 MGP_CAROLIEiJ_G0024885

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Description

neuroligin 1 [Source:MGI Symbol;Acc:MGI:2179435]

Location

Chromosome 3: 20,694,100-21,578,697 reverse strand.

CAROLI_EIJ_v1.1:LT608232.1

About this gene

This gene has 5 transcripts (splice variants), 263 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0057069.1	Nlgn1-201	11778	843aa	MGP_CAROLIEiJ_P0057069	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5P979	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0057070.1	Nlgn1-202	4348	843aa	MGP_CAROLIEiJ_P0057070	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5P979	-
MGP_CAROLIEiJ_T0057071.1	Nlgn1-203	4261	814aa	MGP_CAROLIEiJ_P0057071	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0057072.1	Nlgn1-204	3014	814aa	MGP_CAROLIEiJ_P0057072	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0057073.1	Nlgn1-205	3325	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Paralogues

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