Transcript: ENSDART00000150265.2 mical3b-202

Description

microtubule associated monooxygenase, calponin and LIM domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-050211-1]

Gene Synonyms

si:dkey-153k10.11, si:dkeyp-27e10.1

Location

Chromosome 4: 9,724,804-9,728,730 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 324 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094732.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147699.4	mical3b-201	5964	1673aa	ENSDARP00000122943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000164328.2	mical3b-203	5885	1662aa	ENSDARP00000133311.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB13A8G0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000150265.2	mical3b-202	493	131aa	ENSDARP00000125291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 493 bps, Translation length: 131 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000150265.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000150265.2 mical3b-202

Summary

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Transcript: ENSDART00000150265.2 mical3b-202

Summary

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