Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: cacna1sa ENSAMXG00000008958

.

Description

calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]

Location

Primary_assembly 22: 17,369,149-17,413,599 forward strand.

Astyanax_mexicanus-2.0:CM008321.1

About this gene

This gene has 5 transcripts (splice variants), 193 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000057285.1	cacna1sa-202	5238	1745aa	ENSAMXP00000030294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1IM38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000030721.1	cacna1sa-201	5145	1714aa	ENSAMXP00000053779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1KJ69	-
ENSAMXT00000037361.1	cacna1sa-203	5139	1712aa	ENSAMXP00000029759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1IKJ9	-
ENSAMXT00000036494.1	cacna1sa-204	5133	1710aa	ENSAMXP00000047732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JZ98	-
ENSAMXT00000009211.2	cacna1sa-205	3540	1179aa	ENSAMXP00000009211.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5KNP9	-

.

Summary

.

.