Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: grik1a ENSAMXG00000008675

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Description

glutamate receptor, ionotropic, kainate 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6502]

Location

Primary_assembly 20: 32,341,436-32,428,554 reverse strand.

Astyanax_mexicanus-2.0:CM008319.1

About this gene

This gene has 5 transcripts (splice variants), 246 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000054649.1	grik1a-203	4998	918aa	ENSAMXP00000044262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JPE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000034698.1	grik1a-201	5168	912aa	ENSAMXP00000033458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1IU44	-
ENSAMXT00000030000.1	grik1a-202	5123	897aa	ENSAMXP00000031719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1IRA5	-
ENSAMXT00000056131.1	grik1a-204	4842	866aa	ENSAMXP00000036519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1J597	-
ENSAMXT00000008918.2	grik1a-205	2634	877aa	ENSAMXP00000008918.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5KMV6	-

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Summary

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